Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919061.1_cds_XP_016468342.1_60991
CDS Infomation

[gene=LOC107790882] [db_xref=GeneID:107790882] [protein=sulfoquinovosyl transferase SQD2-like] [protein_id=XP_016468342.1] [location=complement(join(86431..86926,88083..88139,88286..88363,88455..88542,88740..88823,88912..88967,89220..89293,89407..89524,89696..89766,90166..90232,91658..91995))] [gbkey=CDS]
Sequence

ATGTCCAGCTATTCTTCTCTCTTTATAAATTCTTCTTCCTTTACACCCTTTAATTATTCC
TTACCTCCCTCTTGTTTTCATAAAGTTTCTTACTTTTCTACTTCAAGAACATACCCCATT
ACTTTAATTTACAAAAAGATCAATTTTTTACAGTGTAAAAAGAGTTTTAACAAAAGACCC
TTCAAGAAAAGATCCTTAATTGCTCCAAAAGCTAGTAATAAGATGACAATTACTGAGTAC
AGAGATGAAGAGGAAGAGAATCCTCCTCCTTTGCTTGTATCTGAAATGAGTTCAAGGCCT
AGGCGTATTGCTCTCTTTGTTGAGCCTTCTCCTTTTGCGTATGTTTCTGGATATAAGAAC
AGGTTCCAGAATTTTATAAAGTATCTCCGCGAACTGGGGGATGAGGTTATGGTTGTGACG
ACGCATGAAGGAGTACCCCAAGAATTTTATGGGGCAAAGTTGATAGGATCACAGAGTTTT
CCCTGCCCCTGGTACCGGAAAGTACCCCTCTCACTTGCTCTCAGCCCTAGAATAATCTCC
GAGGTAGTACAGTTCAAGCCTGATATCATACATGCATCATCTCCGGGTATAATGGTATTT
GGTGCTCTTATCATTGCGAAACTTCTATCTGTGCCGATTGTAATGTCTTACCACACACAT
GTGCCAGTGTACATACCCAGATACACCTTTAGTTGGCTGGTTCAACCAATGTGGATGGTG
ATAAAGTTTCTACATGGAGCTGCTGATCTTACGCTGGTTCCATCTGCTGCTATTGCAAAG
GATCTGGAAGCTTATAAGGTAACAAAAGCTAACAGAATACGGTTGTGGAATAAGGGTGTT
GATTCCGAGAGCTTCCACCCCCGTTATCGGTCTCATGAAATGCGACTAAGATTAAGTAAT
GGAGAATCCGATAAACCTTTGATAGTCCATGTTGGACGACTTGGAGTTGAGAAGAGTTTG
GATTTCCTCAAAAGGGTCATGGATAGACTTCCAGATGTTCGCATAGCTTTTATTGGAGAT
GGGCCATACAGGGAGGAATTGGAGAAAATGTTCCAAGGTATGCCTGCCGTGTTCACAGGC
ATGTTATTAGGGGAGGAGCTTTCCCAAGCATATGCCAGTGGAGATGTTTTTCTTATGCCT
TCAGAGTCAGAGACACTGGGGCTCGTCGTTTTGGAGGCCATGTCATCAGGGCTTCCTGTA
GTTGCTGCCCGTGCCGGTGGAGTTCCAGATATCATCCCTGACGATCAGCAGGGCAAGATT
GGATATCTGTTTAATCCTGGGGACCTTGACGACTGCATGAGCAAACTAGTGCCCCTTTTG
CACGATGCTGAATTGAGAGAAACTATGGGGAAAACTGCACGCGTAGAAATGGAGAAATAT
GACTGGAAAGCTGCAACAAGAACGATTCGTAACGAACAGTACAGTGCAGCCATTTGGTTC
TGGAAGAAGCAGAGAGCAGTATTCCTGAGACCATTTCAATGGATGTTTAGGTGTATATTC
GCAGTTCCAGAAGTCGACTATAGGTGA

Peptide Sequence

PEP ID

XP_016468342.1
PEP Infomation

PREDICTED: sulfoquinovosyl transferase SQD2-like [Nicotiana tabacum]
Sequence

MSSYSSLFINSSSFTPFNYSLPPSCFHKVSYFSTSRTYPITLIYKKINFLQCKKSFNKRP
FKKRSLIAPKASNKMTITEYRDEEEENPPPLLVSEMSSRPRRIALFVEPSPFAYVSGYKN
RFQNFIKYLRELGDEVMVVTTHEGVPQEFYGAKLIGSQSFPCPWYRKVPLSLALSPRIIS
EVVQFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVQPMWMV
IKFLHGAADLTLVPSAAIAKDLEAYKVTKANRIRLWNKGVDSESFHPRYRSHEMRLRLSN
GESDKPLIVHVGRLGVEKSLDFLKRVMDRLPDVRIAFIGDGPYREELEKMFQGMPAVFTG
MLLGEELSQAYASGDVFLMPSESETLGLVVLEAMSSGLPVVAARAGGVPDIIPDDQQGKI
GYLFNPGDLDDCMSKLVPLLHDAELRETMGKTARVEMEKYDWKAATRTIRNEQYSAAIWF
WKKQRAVFLRPFQWMFRCIFAVPEVDYR

Transcript Sequence

Gene sequence data has not been registered.